• Modeling immunotherapy of antibiotic-resistant bacterial pneumonia – with Dr. Jean Claude Sirard, (Institut Pasteur, Lille, France)
  • Machine learning approaches for prediction in sepsis – with Dr. Margarida Silveira (IST, University of Lisbon), Dr. Luis Coelho (MD, Hospital de Sao Francisco Xavier, Lisbon)
  • Complex dynamics in interacting microbial ecosystems – with Dr. Sten Madec, University of Tours, Tours
  • Evolution of immunity and infection – with Dr. Miguel Soares, Instituto Gulbenkian de Ciencia (Portugal)
  • Feedbacks and evolution in bacterial systems under antibiotic treatment – with Dr. Kevin Wood, University of Michigan (Ann Arbor)
  • Data-driven modeling of within-host dynamics of African trypanosomes – with Dr. Luisa Figueiredo, Instituto de Medicina Molecular, Faculty of Medicine, University of Lisbon
  • Exploring host immunity and antibiotic resistance in treatment dynamics – with Dr. Vitaly Ganusov, University of Tennessee, Knoxville
  • Statistical modelling of animal movement – with Dr. Lorenzo Quaglietta and Dr. Miguel Porto, CIBIO Research Center in Biodiversity and Genetic Resources, University of Porto (see R-package SiMRiv)